PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA30G00112
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family bZIP
Protein Properties Length: 251aa    MW: 27880.7 Da    PI: 10.2534
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA30G00112genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_122.62.3e-07222243526
                 CHHHCHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKka 26 
                 +r +r++kNRe+A rsR+RK++
  AA30G00112 222 RRHKRMIKNRESAARSRARKQE 243
                 699*****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.4E-5222244No hitNo description
PROSITE patternPS000360225240IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009911Biological Processpositive regulation of flower development
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:2000028Biological Processregulation of photoperiodism, flowering
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0043621Molecular Functionprotein self-association
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    Send to blast
MLSSTELQVN HKISDSNKNN TLNRVSSISP SSSSSSSSSS SSTSSSSSSP LLKSQDCQIQ  60
NNRSLNTMEE VWKDINLASL HHLNRNTQHP QHIHDPRFRS HHQNQNPNSI FQDFLNRPLN  120
HEIPTSLSMA SASNGDTSTV TALYTAPIPP PATVLSLNSG AGFEFLDNPD PLVTPNSHLQ  180
SQRHLSNVSS FDTPFEALVT YARLGCFSKK RGQDSDESSG NRRHKRMIKN RESAARSRAR  240
KQECLYKRVR A
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010437402.11e-103PREDICTED: protein FD-like isoform X1
SwissprotQ84JK21e-93FD_ARATH; Protein FD
TrEMBLR0GMJ71e-102R0GMJ7_9BRAS; Uncharacterized protein
STRINGAl_scaffold_0007_4533e-98(Arabidopsis lyrata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM19342772
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35900.11e-92bZIP family protein